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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866089.1_cds_XP_016432596.1_28824
CDS Infomation

[gene=LOC107759223] [db_xref=GeneID:107759223] [protein=proline-rich receptor-like protein kinase PERK5] [protein_id=XP_016432596.1] [location=complement(join(72036..72287,72480..72638,72760..72904,73641..73717,73810..73880,73961..74047,74350..74799,75196..75895))] [gbkey=CDS]
Sequence

ATGCAATCACTTTCTAGTACTACTACGTCCAACAAAAATGGCACTAATTCCCTGACTCCT
AATGGAACTCCCCCTCCTCCTTCTCCTCCTTCAACTAATTCTTCATCTTCACCACCACCA
TCACCGCCACCACAATCTCCTCCACTTACCTCTCCACCCCCACAACCACAATCTCCTCCT
CCGCCCGAAAATTCTCCTCCTCCTTCATCACCACCGCCAACCATAAAGGACTCTCCTCCT
CCGTCATCACCACCACCTCCGGCAGCTTCTCAGCCACCACCAGCATTCTCACCTCCACCG
CCATCCACTACGGTACCACCACCTGCTTCTCCCGATACGCCTCCTCCCCCACCCACATTT
TCTCCCCCACCTCCTGTTTCCTCAGAACCACCTCCATCACCTGCTGCAAAGTTATCTCCT
CCTCTACCGCCTTCAGAAAAACCAGCTGGTGGCGATCCACCTAATTCAGAAAAATCAGTC
GGCGTACCCCATTCAGAAAAATCAGCAGCAGCTGGTTCTTCAGGAAGCAACAATGGCTCG
CCACCGGCTGCTTCAGGTTCGTCGGATATGATTATAGTTGCAGGAATAGCGGTGGCAGGA
GTATTGGTTCTTGCTATTATCATTGTTTGCATAGTGTACTGGAGAAGGACGAAGAAAGAA
CCCTACTATACAGATCCTATTCCTGGACTTCCACCTAAAGGTAGTAATGATCCATACTAC
AAAGGTCCTAAGCCCATGGAACACATTATTAAGGTTTCTTCCGCACCTAATCTAAGTTGC
GATAACAGCTCTACCGTCTGTGGCCAAGCTCTTGTGCCATCGCCAAGTTTTGGTGGGTTC
TCACAGAGTCAGTTCACTTATGAGGAGCTAGCTATAGCAACTTCTGGATTTTCTAAGGCC
AATATTTTAGGCCAAGGTGGTTTTGGGTATGTACACAAAGGTGTTTTGGTTGGTGGAAGG
GTGGTAGCTGTCAAGAGCTTGAAGTCGGGCAGTGGACAAGGTGAACGAGAATTTCAGGCA
GAGGTTGAGATCATTAGCAGAGTTCATCATCGCCACCTTGTTTCTCTTGTTGGATATTGC
ATTGCTGATGGCCAGCGAATGTTGGTCTATGAGTATGTTCCGAACAAAACCTTGGATTTC
CATCTTCATGGGAAGGGACATCATGTTATGGATTGGGGAACAAGGCTTAAAATTGCATTG
GGATCAGCCAAAGGATTAGCTTATCTCCATGAAGATTGCCATCCTAAAATTATCCACCGT
GACATAAAGGCTGCAAACATTCTACTTGAGGACAACTTTGAAGCCAAGGTGGCTGATTTT
GGATTGGCTAAACTTTCTTCTGATAACTTCACTCATATCTCCACTCGTGTTATGGGAACT
TTCGGGTACTTGGCTCCTGAATATGCATCAAGTGGCAAGCTAACAGACAAATCAGATGTA
TTTTCATTTGGAGTTGTGCTTTTGGAACTCATAACTGGGAAGAAACCTGTTGATCCTAGC
AATATGGTGGAAGACAGTTTAGTAGACTGGGCTAAGCCCCGACTTAAAAGAGCCTTAGAA
GAGGGAAATTATGATGAATTGGTAGGTGCTCCTCTCGAAGGAAACGTTCCAGATGAGTTG
CATCGGTTAGTTGCCTGTGCTGCTGCTAGCACTCGTCATTCTGCTAGGAGACGTCCAAAG
ATGAGTCAGATTGTACGAGCCTTGGATGGCGATTCATCTTTGGAAGACTTGAGCGATCGT
ACAAAGCCAAGTGGGAGCTCTGAATCCTATTATACTGGTGTATACAATGCTGACATGATC
AAGTTCAGGAAAATGGTGATACCAAGCCAAGAATTCAATAGCAGTGAATATGGAGCGACA
AGTGAATATGGACTCAACCCTTCCTCTTCCTCAAGCAGTGACTCCGGAGAGTTTGGTTAT
CATAAGGGGGGTAGAAGATGA

Peptide Sequence

PEP ID

XP_016432596.1
PEP Infomation

PREDICTED: proline-rich receptor-like protein kinase PERK5 [Nicotiana tabacum]
Sequence

MQSLSSTTTSNKNGTNSLTPNGTPPPPSPPSTNSSSSPPPSPPPQSPPLTSPPPQPQSPP
PPENSPPPSSPPPTIKDSPPPSSPPPPAASQPPPAFSPPPPSTTVPPPASPDTPPPPPTF
SPPPPVSSEPPPSPAAKLSPPLPPSEKPAGGDPPNSEKSVGVPHSEKSAAAGSSGSNNGS
PPAASGSSDMIIVAGIAVAGVLVLAIIIVCIVYWRRTKKEPYYTDPIPGLPPKGSNDPYY
KGPKPMEHIIKVSSAPNLSCDNSSTVCGQALVPSPSFGGFSQSQFTYEELAIATSGFSKA
NILGQGGFGYVHKGVLVGGRVVAVKSLKSGSGQGEREFQAEVEIISRVHHRHLVSLVGYC
IADGQRMLVYEYVPNKTLDFHLHGKGHHVMDWGTRLKIALGSAKGLAYLHEDCHPKIIHR
DIKAANILLEDNFEAKVADFGLAKLSSDNFTHISTRVMGTFGYLAPEYASSGKLTDKSDV
FSFGVVLLELITGKKPVDPSNMVEDSLVDWAKPRLKRALEEGNYDELVGAPLEGNVPDEL
HRLVACAAASTRHSARRRPKMSQIVRALDGDSSLEDLSDRTKPSGSSESYYTGVYNADMI
KFRKMVIPSQEFNSSEYGATSEYGLNPSSSSSSDSGEFGYHKGGRR

Transcript Sequence

Gene sequence data has not been registered.